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Dernière mise à jour : Mai 2018

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SPS - Saclay Plant Sciences

Publications 2011

Abdelkarim, M., Vintonenko, N., Starzec, A., Robles, A., Aubert, J., Martin, M.L., Mourah, S., Podgorniak, M.P., Rodrigues-Ferreira, S., Nahmias, C., Couraud, P.O., Doliger, C., Sainte-Catherine, O., Peyri, N., Chen, L., Mariau, J., Etienne, M., Perret, G.Y., Crepin, M., Poyet, J.L., Khatib, A.M., Di Benedetto, M. (2011). Invading basement membrane matrix is sufficient for MDA-MB-231 breast cancer cells to develop a stable in vivo metastatic phenotype. PLoS One 6, e23334.

Adam, H., Marguerettaz, M., Qadri, R., Adroher, B., Richaud, F., Collin, M., Thuillet, A.C., Vigouroux, Y., Laufs, P., Tregear, J.W., Jouannic, S. (2011a). Divergent Expression Patterns of miR164 and CUP-SHAPED COTYLEDON Genes in Palms and Other Monocots: Implication for the Evolution of Meristem Function in Angiosperms. Molecular Biology and Evolution 28, 1439-1454.

Adam, Z., Frottin, F., Espagne, C., Meinnel, T., Giglione, C. (2011b). Interplay Between N-Terminal Methionine Excision and FtsH Protease Is Essential for Normal Chloroplast Development and Function in Arabidopsis. Plant Cell 23, 3745-3760.

Agrawal, G.K., Bourguignon, J., Rolland, N., Ephritikhine, G., Ferro, M., Jaquinod, M., Alexiou, K.G., Chardot, T., Chakraborty, N., Jolivet, P., Doonan, J.H., Rakwal, R. (2011). Plant organelle proteomics: Collaborating for optimal cell function. Mass Spectrometry Reviews 30, 772–853.

AIMC. (2011). Evidence for network evolution in an Arabidopsis interactome map. Science 333, 601-607.

Alcazar, R., Reymond, M., Schmitz, G., de Meaux, J. (2011). Genetic and evolutionary perspectives on the interplay between plant immunity and development. Current Opinion in Plant Biology 14, 378-384.

Allais, F., Lancelot, A., Pion, F., Mazeau, K., Méry, S., Ducrot, P. (2011a). Synthesis, molecular modeling and characterization of new polyphenolic dendronized polymers via ROMP. Polymer Preprints 52, 379.

Allais, F., Pla, T.J.L., Ducrot, P.-H. (2011b). An Access to Chiral β-Benzyl-γ-butyrolactones and Its Application to the Synthesis of Enantiopure (+)-Secoisolariciresinol, (-)-Secoisolariciresinol, and (-)-Enterolactone. Synthesis-Stuttgart, 1456-1464.

Amoroso, A., Concia, L., Maggio, C., Raynaud, C., Bergounioux, C., Crespan, E., Cella, R., Maga, G. (2011). Oxidative DNA damage bypass in Arabidopsis thaliana requires DNA polymerase lambda and proliferating cell nuclear antigen 2. Plant Cell 23, 806-822.

Arc, E., Galland, M., Cueff, G., Godin, B., Lounifi, I., Job, D., Rajjou, L. (2011). Reboot the system thanks to protein post-translational modifications and proteome diversity: How quiescent seeds restart their metabolism to prepare seedling establishment. Proteomics 11, 1606-1618.

Arraouadi, S., Chardon, F., Huguet, T., Aouani, M.E., Badri, M. (2011). QTLs mapping of morphological traits related to salt tolerance in Medicago truncatula. Acta Physiologiae Plantarum 33, 917-926.

Aubert, A., Marion, J., Boulogne, C., Bourge, M., Abreu, S., Bellec, Y., Faure, J.D., Satiat-Jeunemaitre, B. (2011). Sphingolipids involvement in plant endomembrane differentiation: the BY2 case. Plant J 65, 958-971.

Bach, L., Gissot, L., Marion, J., Tellier, F., Moreau, P., Satiat-Jeunemaitre, B., Palauqui, J.C., Napier, J.A., Faure, J.D. (2011). Very-long-chain fatty acids are required for cell plate formation during cytokinesis in Arabidopsis thaliana. J Cell Sci 124, 3223-3234.

Badri, M., Chardon, F., Huguet, T., Aouani, M.E. (2011). Quantitative trait loci associated with drought tolerance in the model legume Medicago truncatula. Euphytica 181, 415-428.

Barbier-Brygoo, H., De Angeli, A., Filleur, S., Frachisse, J.M., Gambale, F., Thomine, S., Wege, S. (2011). Anion channels/transporters in plants: from molecular bases to regulatory networks. Annu Rev Plant Biol 62, 25-51.

Barbour, M.M., Hunt, J.E., Kodama, N., Laubach, J., McSeveny, T.M., Rogers, G.N., Tcherkez, G., Wingate, L. (2011a). Rapid changes in delta(1)(3)C of ecosystem-respired CO after sunset are consistent with transient (1)(3)C enrichment of leaf respired CO. New Phytol 190, 990-1002.

Barbour, M.M., Tcherkez, G., Bickford, C.P., Mauve, C., Lamothe, M., Sinton, S., Brown, H. (2011b). delta(13) C of leaf-respired CO(2) reflects intrinsic water-use efficiency in barley. Plant Cell Environ 34, 792-799.

Bardou, F., Merchan, F., Ariel, F., Crespi, M. (2011). Dual RNAs in plants. Biochimie 93, 1950-1954.

Bauer, P., Blondet, E. (2011). Transcriptome analysis of ein3 eil1 mutants in response to iron deficiency. Plant Signal Behav 6, 1669-1671.

Bazin, J., Langlade, N., Vincourt, P., Arribat, S., Balzergue, S., El-Maarouf-Bouteau, H., Bailly, C. (2011). Targeted mRNA oxidation regulates sunflower seed dormancy alleviation during dry after-ripening. Plant Cell 23, 2196-2208.

Bérard, C., Martin-Magniette, M., Brunaud, V., Aubourg, S., Robin, S. (2011). Unsupervised Classification for Tiling Arrays: ChIP-chip and Transcriptome. Statistical Applications in Genetics and Molecular Biology 10.

Berger, N., Dubreucq, B., Roudier, F., Dubos, C., Lepiniec, L. (2011). Transcriptional Regulation of Arabidopsis LEAFY COTYLEDON2 Involves RLE, a cis-Element That Regulates Trimethylation of Histone H3 at Lysine-27. The Plant cell 23, 4065-4078.

Berthet, S., Demont-Caulet, N., Pollet, B., Bidzinski, P., Cezard, L., Le Bris, P., Borrega, N., Herve, J., Blondet, E., Balzergue, S., Lapierre, C., Jouanin, L. (2011). Disruption of LACCASE4 and 17 Results in Tissue-Specific Alterations to Lignification of Arabidopsis thaliana Stems. Plant Cell 23, 1124-1137.

Bilsborough, G.D., Runions, A., Barkoulas, M., Jenkins, H.W., Hasson, A., Galinha, C., Laufs, P., Hay, A., Prusinkiewicz, P., Tsiantis, M. (2011). Model for the regulation of Arabidopsis thaliana leaf margin development. Proc Natl Acad Sci U S A 108, 3424-3429.

Bischoff, V., Desprez, T., Mouille, G., Vernhettes, S., Gonneau, M., Hofte, H. (2011). Phytochrome regulation of cellulose synthesis in Arabidopsis. Current biology : CB 21, 1822-1827.

Bouxin, F., Baumberger, S., Renault, J.H., Dole, P. (2011). Study of a specific lignin model: gamma-oxidation and how it influences the hydrolysis efficiency of alcohol-aldehyde dehydrogenation copolymers. Bioresour Technol 102, 5567-5573.

Bouyer, D., Roudier, F., Heese, M., Andersen, E.D., Gey, D., Nowack, M.K., Goodrich, J., Renou, J.P., Grini, P.E., Colot, V., Schnittger, A. (2011). Polycomb repressive complex 2 controls the embryo-to-seedling phase transition. PLoS Genet 7, e1002014.

Boyer, F., Rameau, C., Pillot, J., De Saint-Germain, A., Pouvreau, J. (2011). Nouveaux analogues de strigolactones spécifiquement actif sur le contrôle de la ramification des plantes agissant faiblement sur la germination des plantes parasites de type Orobanche, I. DIRV-11-0027, ed.

Bresson, A., Jorge, V., Dowkiw, A., Guerin, V., Bourgait, I., Tuskan, G.A., Schmutz, J., Chalhoub, B., Bastien, C., Faivre Rampant, P. (2011). Qualitative and quantitative resistances to leaf rust finely mapped within two nucleotide-binding site leucine-rich repeat (NBS-LRR)-rich genomic regions of chromosome 19 in poplar. New Phytol 192, 151-163.

Brkljacic, J., Grotewold, E., Scholl, R., Mockler, T., Garvin, D.F., Vain, P., Brutnell, T., Sibout, R., Bevan, M., Budak, H., Caicedo, A.L., Gao, C.X., Gu, Y., Hazen, S.P., Holt, B.F., Hong, S.Y., Jordan, M., Manzaneda, A.J., Mitchell-Olds, T., Mochida, K., Mur, L.A.J., Park, C.M., Sedbrook, J., Watt, M., Zheng, S.J., Vogel, J.P. (2011). Brachypodium as a Model for the Grasses: Today and the Future. Plant Physiology 157, 3-13.

Budar, F., Roux, F. (2011). The role of organelle genomes in plant adaptation: time to get to work! Plant Signal Behav 6, 635-639.

Busch, B.L., Schmitz, G., Rossmann, S., Piron, F., Ding, J., Bendahmane, A., Theres, K. (2011). Shoot branching and leaf dissection in tomato are regulated by homologous gene modules. Plant Cell 23, 3595-3609.

Camehl, I., Drzewiecki, C., Vadassery, J., Shahollari, B., Sherameti, I., Forzani, C., Munnik, T., Hirt, H., Oelmuller, R. (2011). The OXI1 kinase pathway mediates Piriformospora indica-induced growth promotion in Arabidopsis. PLoS Pathog 7, e1002051.

Canas, R.A., Amiour, N., Quillere, I., Hirel, B. (2011). An integrated statistical analysis of the genetic variability of nitrogen metabolism in the ear of three maize inbred lines (Zea mays L.). Journal of experimental botany 62, 2309-2318.

Caranta, C., Aranda, M., Tepfer, M., Lopez-Moya, J. (2011). Recent advances in plant virology. (Norfolk, UK: Caister Academic Press).

Castaings, L., Marchive, C., Meyer, C., Krapp, A. (2011). Nitrogen signalling in Arabidopsis: how to obtain insights into a complex signalling network. J Exp Bot 62, 1391-1397.

Castrillo, G., Turck, F., Leveugle, M., Lecharny, A., Carbonero, P., Coupland, G., Paz-Ares, J., Onate-Sanchez, L. (2011). Speeding cis-trans regulation discovery by phylogenomic analyses coupled with screenings of an arrayed library of Arabidopsis transcription factors. PLoS One 6, e21524.

Chan, J., Eder, M., Crowell, E.F., Hampson, J., Calder, G., Lloyd, C. (2011). Microtubules and CESA tracks at the inner epidermal wall align independently of those on the outer wall of light-grown Arabidopsis hypocotyls. Journal of Cell Science 124, 1088-1094.

Cheminant, S., Wild, M., Bouvier, F., Pelletier, S., Renou, J.P., Erhardt, M., Hayes, S., Terry, M.J., Genschik, P., Achard, P. (2011). DELLAs regulate chlorophyll and carotenoid biosynthesis to prevent photooxidative damage during seedling deetiolation in Arabidopsis. Plant Cell 23, 1849-1860.

Chen, S., Nelson, M.N., Chèvre, A.-M., Jenczewski, E., Li, Z., Mason, A.S., Meng, J., Plummer, J.A., Pradhan, A., Siddique, K.H.M., Snowdon, R.J., Yan, G., Zhou, W., Cowling, W.A. (2011a). Trigenomic Bridges for Brassica Improvement. Critical Reviews in Plant Sciences 30, 524-547.

Chen, X., Hu, Y., Zhou, D.X. (2011b). Epigenetic gene regulation by plant Jumonji group of histone demethylase. Biochim Biophys Acta 1809, 421-426.

Cirou, A., Raffoux, A., Diallo, S., Latour, X., Dessaux, Y., Faure, D. (2011). Gamma-caprolactone stimulates growth of quorum-quenching Rhodococcus populations in a large-scale hydroponic system for culturing Solanum tuberosum. Res Microbiol 162, 945-950.

Claverie, M., Dirlewanger, E., Bosselut, N., Van Ghelder, C., Voisin, R., Kleinhentz, M., Lafargue, B., Abad, P., Rosso, M.N., Chalhoub, B., Esmenjaud, D. (2011). The Ma gene for complete-spectrum resistance to Meloidogyne species in Prunus is a TNL with a huge repeated C-terminal post-LRR region. Plant Physiol 156, 779-792.

Clepet, C. (2011). RNA captor: a tool for RNA characterization. PLoS One 6, e18445.

Clepet, C., Joobeur, T., Zheng, Y., Jublot, D., Huang, M., Truniger, V., Boualem, A., Hernandez-Gonzalez, M.E., Dolcet-Sanjuan, R., Portnoy, V., Mascarell-Creus, A., Cano-Delgado, A.I., Katzir, N., Bendahmane, A., Giovannoni, J.J., Aranda, M.A., Garcia-Mas, J., Fei, Z. (2011). Analysis of expressed sequence tags generated from full-length enriched cDNA libraries of melon. BMC Genomics 12, 252.

Cottyn, B., Kollmann, A., Waffo-Teguo, P., Ducrot, P.H. (2011). Rationalization and in vitro modeling of the chemical mechanisms of the enzymatic oxidation of phenolic compounds in planta: from flavonols and stilbenoids to lignins. Chemistry 17, 7282-7287.

Crowell, E.F., Timpano, H., Desprez, T., Franssen-Verheijen, T., Emons, A.M., Hofte, H., Vernhettes, S. (2011). Differential regulation of cellulose orientation at the inner and outer face of epidermal cells in the Arabidopsis hypocotyl. Plant Cell 23, 2592-2605.

Culhaoglu, T., Zheng, D., Mechin, V., Baumberger, S. (2011). Adaptation of the Carrez procedure for the purification of ferulic and p-coumaric acids released from lignocellulosic biomass prior to LC/MS analysis. J Chromatogr B Analyt Technol Biomed Life Sci 879, 3017-3022.

D'Angelo-Picard, C., Chapelle, E., Ratet, P., Faure, D., Dessaux, Y. (2011). Transgenic plants expressing the quorum quenching lactonase AttM do not significantly alter root-associated bacterial populations. Res Microbiol 162, 951-958.

de Zelicourt, A., Diet, A., Marion, J., Laffont, C., Ariel, F., Moison, M., Zahaf, O., Crespi, M., Gruber, V., Frugier, F. (2011). Dual implication of a Medicago truncatula NAC transcription factor in root abiotic stress response and symbiotic nodule senescence. Plant J.

Dechorgnat, J., Nguyen, C.T., Armengaud, P., Jossier, M., Diatloff, E., Filleur, S., Daniel-Vedele, F. (2011). From the soil to the seeds: the long journey of nitrate in plants. J Exp Bot 62, 1349-1359.

Derozier, S., Samson, F., Tamby, J.P., Guichard, C., Brunaud, V., Grevet, P., Gagnot, S., Label, P., Leple, J.C., Lecharny, A., Aubourg, S. (2011). Exploration of plant genomes in the FLAGdb++ environment. Plant Methods 7, 8.

Dobrenel, T., Marchive, C., Sormani, R., Moreau, M., Mozzo, M., Montane, M.H., Menand, B., Robaglia, C., Meyer, C. (2011). Regulation of plant growth and metabolism by the TOR kinase. Biochem Soc Trans 39, 477-481.

Drouaud, J., Mezard, C. (2011). Characterization of meiotic crossovers in pollen from Arabidopsis thaliana. Methods Mol Biol 745, 223-249.

Dubois, A., Remay, A., Raymond, O., Balzergue, S., Chauvet, A., Maene, M., Pecrix, Y., Yang, S.H., Jeauffre, J., Thouroude, T., Boltz, V., Martin-Magniette, M.L., Janczarski, S., Legeai, F., Renou, J.P., Vergne, P., Le Bris, M., Foucher, F., Bendahmane, M. (2011a). Genomic Approach to Study Floral Development Genes in Rosa sp. PLoS One 6, e28455.

Dubois, E., Cordoba-Canero, D., Massot, S., Siaud, N., Gakiere, B., Domenichini, S., Guerard, F., Roldan-Arjona, T., Doutriaux, M.P. (2011b). Homologous Recombination Is Stimulated by a Decrease in dUTPase in Arabidopsis. PLoS One 6.

Duroc, Y., Bouchez, D., Pastuglia, M. (2011). The preprophase band and division site determination in land plants. In The Plant Cytoskeleton, B. Liu, ed (New York: Springer USA), pp. 145-186.

Faivre Rampant, P., Lesur, I., Boussardon, C., Bitton, F., Martin-Magniette, M.L., Bodenes, C., Le Provost, G., Berges, H., Fluch, S., Kremer, A., Plomion, C. (2011). Analysis of BAC end sequences in oak, a keystone forest tree species, providing insight into the composition of its genome. BMC Genomics 12, 292.

Feraru, E., Feraru, M.I., Kleine-Vehn, J., Martiniere, A., Mouille, G., Vanneste, S., Vernhettes, S., Runions, J., Friml, J. (2011). PIN Polarity Maintenance by the Cell Wall in Arabidopsis. Current Biology 21, 338-343.

Forzani, C., Carreri, A., de la Fuente van Bentem, S., Lecourieux, D., Lecourieux, F., Hirt, H. (2011). The Arabidopsis protein kinase Pto-interacting 1-4 is a common target of the oxidative signal-inducible 1 and mitogen-activated protein kinases. Febs J 278, 1126-1136.

Foyer, C.H., Noctor, G. (2011). Ascorbate and glutathione: the heart of the redox hub. Plant Physiol 155, 2-18.

Foyer, C.H., Noctor, G., Hodges, M. (2011). Respiration and nitrogen assimilation: targeting mitochondria-associated metabolism as a means to enhance nitrogen use efficiency. J Exp Bot 62, 1467-1482.

Frey, A., Effroy, D., Lefebvre, V., Seo, M., Perreau, F., Berger, A., Sechet, J., To, A., North, H.M., Marion-Poll, A. (2011). Epoxycarotenoid cleavage by NCED5 fine-tunes ABA accumulation and affects seed dormancy and drought tolerance with other NCED family members. Plant J.

Gery, C., Zuther, E., Schulz, E., Legoupi, J., Chauveau, A., McKhann, H., Hincha, D.K., Teoule, E. (2011). Natural variation in the freezing tolerance of Arabidopsis thaliana: effects of RNAi-induced CBF depletion and QTL localisation vary among accessions. Plant Sci 180, 12-23.

Gilbert, A., Silvestre, V., Robins, R.J., Tcherkez, G., Remaud, G.S. (2011a). A 13C NMR spectrometric method for the determination of intramolecular delta13C values in fructose from plant sucrose samples. New Phytol 191, 579-588.

Gilbert, A., Silvestre, V., Segebarth, N., Tcherkez, G., Guillou, C., Robins, R.J., Akoka, S., Remaud, G.S. (2011b). The intramolecular (1)(3)C-distribution in ethanol reveals the influence of the CO -fixation pathway and environmental conditions on the site-specific (1)(3)C variation in glucose. Plant Cell Environ 34, 1104-1112.

Giraut, L., Falque, M., Drouaud, J., Pereira, L., Martin, O.C., Mezard, C. (2011). Genome-wide crossover distribution in Arabidopsis thaliana meiosis reveals sex-specific patterns along chromosomes. PLoS genetics 7, e1002354.

Gohon, Y., Vindigni, J.D., Pallier, A., Wien, F., Celia, H., Giuliani, A., Tribet, C., Chardot, T., Briozzo, P. (2011). High water solubility and fold in amphipols of proteins with large hydrophobic regions: Oleosins and caleosin from seed lipid bodies. Biochim Biophys Acta 1808, 706-716.

Gonzalez, M., Xu, M., Esteras, C., Roig, C., Monforte, A.J., Troadec, C., Pujol, M., Nuez, F., Bendahmane, A., Garcia-Mas, J., Pico, B. (2011). Towards a TILLING platform for functional genomics in Piel de Sapo melons. BMC Res Notes 4, 289.

Grappin, P., Collet, B., Yang, H., Jallet, D., Oge, L., Zubarev, R. (2011). New proteomic developments to analyze protein isomerization and their biological significance in plants. J Proteomics 74, 1475-1482.

Guenin, S., Mareck, A., Rayon, C., Lamour, R., Ndong, Y.A., Domon, J.M., Senechal, F., Fournet, F., Jamet, E., Canut, H., Percoco, G., Mouille, G., Rolland, A., Rusterucci, C., Guerineau, F., Van Wuytswinkel, O., Gillet, F., Driouich, A., Lerouge, P., Gutierrez, L., Pelloux, J. (2011). Identification of pectin methylesterase 3 as a basic pectin methylesterase isoform involved in adventitious rooting in Arabidopsis thaliana. New Phytologist 192, 114-126.

Guerard, F., Petriacq, P., Gakiere, B., Tcherkez, G. (2011). Liquid chromatography/time-of-flight mass spectrometry for the analysis of plant samples: A method for simultaneous screening of common cofactors or nucleotides and application to an engineered plant line. Plant Physiol Biochem.

Guillon, F., Larre, C., Petipas, F., Berger, A., Moussawi, J., Rogniaux, H., Santoni, A., Saulnier, L., Jamme, F., Miquel, M., Lepiniec, L., Dubreucq, B. (2011). A comprehensive overview of grain development in Brachypodium distachyon variety Bd21. Journal of Experimental Botany in press.

Hasson, A., Plessis, A., Blein, T., Adroher, B., Grigg, S., Tsiantis, M., Boudaoud, A., Damerval, C., Laufs, P. (2011). Evolution and Diverse Roles of the CUP-SHAPED COTYLEDON Genes in Arabidopsis Leaf Development. Plant Cell 23, 54-68.

Heidari, B., Matre, P., Nemie-Feyissa, D., Meyer, C., Rognli, O.A., Moller, S.G., Lillo, C. (2011). Protein Phosphatase 2A B55 and A Regulatory Subunits Interact with Nitrate Reductase and Are Essential for Nitrate Reductase Activation. Plant Physiology 156, 165-172.

Heiss-Blanquet, S., Zheng, D., Ferreira, N.L., Lapierre, C., Baumberger, S. (2011). Effect of pretreatment and enzymatic hydrolysis of wheat straw on cell wall composition, hydrophobicity and cellulase adsorption. Bioresource Technology 102, 5938-5946.

Hirsch, J., Misson, J., Crisp, P.A., David, P., Bayle, V., Estavillo, G.M., Javot, H., Chiarenza, S., Mallory, A.C., Maizel, A., Declerck, M., Pogson, B.J., Vaucheret, H., Crespi, M., Desnos, T., Thibaud, M.C., Nussaume, L., Marin, E. (2011). A novel fry1 allele reveals the existence of a mutant phenotype unrelated to 5'->3' exoribonuclease (XRN) activities in Arabidopsis thaliana roots. PLoS One 6, e16724.

Hirt, H., Garcia, A.V., Oelmuller, R. (2011). AGC kinases in plant development and defense. Plant Signal Behav 6, 1030-1033.

Jauvion, V., Mallory, A., Vaucheret, H. (2011). Deciphering post-transcriptional gene silencing pathways through genetic screens. . In RNAi technology, R.K. Gaur, Y. Gafni, P. Sharma, and V.K. Gupta, eds (CRC press. Science publishers), pp. 17-46.

Jay, F., Wang, Y., Yu, A., Taconnat, L., Pelletier, S., Colot, V., Renou, J.P., Voinnet, O. (2011). Misregulation of AUXIN RESPONSE FACTOR 8 underlies the developmental abnormalities caused by three distinct viral silencing suppressors in Arabidopsis. PLoS Pathog 7, e1002035.

Jenczewski, E., Mercier, R., Macaisne, N., Mézard, C. (2011). Meiosis: recombination and the control of cell division. In Diversity of genomes in plants. (Springer-Verlag.

Job, D., Pelletier, G., Pernollet, J.C. (2011). On the trail of domestications, migrations and invasions in agriculture Foreword. Comptes Rendus Biologies 334, 169-170.

Jolivet, P., Boulard, C., Bellamy, A., Valot, B., d'Andrea, S., Zivy, M., Nesi, N., Chardot, T. (2011). Oil body proteins sequentially accumulate throughout seed development in Brassica napus. J Plant Physiol 168, 2015-2020.

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