Know more

Our use of cookies

Cookies are a set of data stored on a user’s device when the user browses a web site. The data is in a file containing an ID number, the name of the server which deposited it and, in some cases, an expiry date. We use cookies to record information about your visit, language of preference, and other parameters on the site in order to optimise your next visit and make the site even more useful to you.

To improve your experience, we use cookies to store certain browsing information and provide secure navigation, and to collect statistics with a view to improve the site’s features. For a complete list of the cookies we use, download “Ghostery”, a free plug-in for browsers which can detect, and, in some cases, block cookies.

Ghostery is available here for free:

You can also visit the CNIL web site for instructions on how to configure your browser to manage cookie storage on your device.

In the case of third-party advertising cookies, you can also visit the following site:, offered by digital advertising professionals within the European Digital Advertising Alliance (EDAA). From the site, you can deny or accept the cookies used by advertising professionals who are members.

It is also possible to block certain third-party cookies directly via publishers:

Cookie type

Means of blocking

Analytical and performance cookies

Google Analytics

Targeted advertising cookies


The following types of cookies may be used on our websites:

Mandatory cookies

Functional cookies

Social media and advertising cookies

These cookies are needed to ensure the proper functioning of the site and cannot be disabled. They help ensure a secure connection and the basic availability of our website.

These cookies allow us to analyse site use in order to measure and optimise performance. They allow us to store your sign-in information and display the different components of our website in a more coherent way.

These cookies are used by advertising agencies such as Google and by social media sites such as LinkedIn and Facebook. Among other things, they allow pages to be shared on social media, the posting of comments, and the publication (on our site or elsewhere) of ads that reflect your centres of interest.

Our EZPublish content management system (CMS) uses CAS and PHP session cookies and the New Relic cookie for monitoring purposes (IP, response times).

These cookies are deleted at the end of the browsing session (when you log off or close your browser window)

Our EZPublish content management system (CMS) uses the XiTi cookie to measure traffic. Our service provider is AT Internet. This company stores data (IPs, date and time of access, length of the visit and pages viewed) for six months.

Our EZPublish content management system (CMS) does not use this type of cookie.

For more information about the cookies we use, contact INRA’s Data Protection Officer by email at or by post at:

24, chemin de Borde Rouge –Auzeville – CS52627
31326 Castanet Tolosan CEDEX - France

Dernière mise à jour : Mai 2018

Menu Logo Principal

Home page

Posters acceptés - accepted Poster paper - Premier appel

Liste des soumissions de type Poster ou Affiche acceptées lors du premier appel à soumissions dans le cadre de la Conférence JOBIM 2015 - List of accepted poster submissions, first call,at the JOBIM 2015 Conference.
  • Post-001 (#45) - Ikram ALLAM - On the Interest of Semi-Supervised Approaches with Spatial Dependence in Structural Alphabet Encoding
  • Post-002 (#90) - Leslie REGAD - SA-conf : un outil d'analyse et de comparaison de la variabilité de séquence et de structure d'un ensemble de conformères d'une protéine
  • Post-003 (#92) - Anne BADEL - Computational analysis of the Gibberellin signaling in moss
  • Post-004 (#106) - Yoann DUFRESNE - Smiles2Monomers: Tool for monomeric structure search
  • Post-005 (#140) - Alexandre BORREL - Salt bridges in protein ligand interactions
  • Post-006 (#142) - Seyed Ziaeddin ALBORZI - EC-PSI: Associating Enzyme Commission Numbers with Pfam Domains
  • Post-007 (#5) - Julien FUMEY - Tempo and mode in Astyanax mexicanus cavefish evolution: a population genomic reappraisal
  • Post-008 (#29) - Dominique GUYOT - Using HMMs to Improve Sequence Clustering Method
  • Post-009 (#32) - Emma SAULNIER - Inferring epidemiological parameters from summary statistics of phylogenetic trees
  • Post-010 (#36) - Franck CERUTTI - Evolutionary dynamics of Listeria monocytogenes sRNA
  • Post-011 (#38) - Gabriel V. MARKOV - Evolution of metabolic pathways in nematodes: integrating genomics and metabolomics
  • Post-012 (#61) - Magali RICHARD - Identification of fitness advantage in dynamic environment by modelisation of BAR- seq data
  • Post-013 (#63) - Rémi PLANEL - Web tools for the phylogenetic exploration of genomes history
  • Post-014 (#8) - Sarah DJEBALI - Conservation of recurrent chimeras between human and mouse
  • Post-015 (#15) - Pierre DELPECH - Analyse du transcriptome de Lactococcus garvieae durant l’inhibition de Staphylococcus aureus par RNA-seq
  • Post-016 (#16) - MARIE GARAVILLON-TOURNAYRE - High throuput workflow for RNAseq data treatment linking laboratory data server and remote parallel calculation platform
  • Post-017 (#18) - Isabelle LESUR - Local adaptation and genetic adaptive potential of forest trees
  • Post-018 (#33) - David LOPEZ - Sequence-driven in silico discovery of potential effectors involved in Corynespora cassiicola pathogenesis
  • Post-019 (#35) - Marie GARAVILLON-TOURNAYRE - Transcriptome and ecophysiological data of Populus nigra genotypes during drought stress
  • Post-020 (#47) - Amandine CAMPAN-FOURNIER - Analyse de 32 souches de Legionella pneumophila de sévérités variables afin d'identifier les déterminants de la pathogénicité
  • Post-021 (#48) - Géraldine CAUMES - Microbial biomineralization processes as part of the environmental phosphorus cycle: deciphering the genomic diversity and evolution of candidate gene families
  • Post-022 (#53) - Valentin LOUX - Mutations and genomic islands can explain the strain dependency of sugar utilization in 21 strains of Propionibacterium freudenreichii
  • Post-023 (#102) - Théophile KAZMIERCZAK - Bioinformatic analysis of NAC transcription factor involved in senescence regulation in Medicago      
  • Post-024 (#109) - Magalie LEVEUGLE - Rapsodyn Whole Exome capture and genotyping in the polyploid Brassica napus
  • Post-025 (#114) - Valérie POLONAIS - Draft genome sequence of Tubulinosema ratisbonensis, a microsporidian parasite of Drosophila melanogaster
  • Post-026 (#120) - Jonathan LORENZO - Application du système GenFam à la réponse au stress des plantes : intégration de l'identification d'éléments cis spécifiques
  • Post-027 (#122) - Rachel LEGENDRE - RiboTools: A Galaxy toolbox for qualitative Ribosome Profiling analysis
  • Post-028 (#125) - Sarah FARHAT - Exploring the mystery that leads to a specific parasite infection for marine blooming dinoflagellates
  • Post-029 (#6) - Zohra SADOUK-HACHAÏCHI - Modélisation de la cinétique de croissance d’un consortium bactérien cultivé sur le gazole
  • Post-030 (#19) - Gabriel CARVALHO - Individual-based modeling of bacterial biofilms’ resilience
  • Post-031 (#31) - Nordine KHERAKI - A systems-approach for modeling and analyzing the Ubiquitin/De-ubiquitin balance during virus infection
  • Post-032 (#39) - Floréal CABANETTES - Metabolic network annotation with MetExplore
  • Post-033 (#51) - Maxime CHAZALVIEL - Comparaison visuelle de sous-réseaux métaboliques avec MetExploreViz
  • Post-034 (#112) - Shérazade BRAHAM - Inference of the protein interaction network between Fusobacterium nucleatum putative secretome and the human host
  • Post-035 (#144) - Guillaume MADELAINE - Structural simplification of chemical reaction networks
  • Post-036 (#147) - Marc LEGEAY - Construction et Analyse de Réseau de Gènes Contextuels dans le Domaine Végétal
  • Post-037 (#153) - Hugo PEREIRA - Interface development of a new clustering tool for co-regulated genes identification (CORGI)
  • Post-038 (#160) - Charles LECELLIER - Probing microRNA regulation
  • Post-039 (#161) - Andreas ZANZONI - Integration of quantitative proteomics data and interaction networks: identification of dys-regulated cellular functions during cancer progression
  • Post-040 (#167) - Bertrand LAFORGE - Multiscale Modeling of cancer in C. Elegans
  • Post-041 (#23) - Fanny BONNAFOUS - Genome Wide Association Studies on sunflower flowering time
  • Post-042 (#42) - Alexandra DUHNEN - Genomic prediction of agronomic traits in soybean
  • Post-043 (#46) - Florent CHUFFART - Nouvelle approche en génétique quantitative : détection de loci contrôlant finement la distribution d’un caractère cellulaire probabiliste
  • Post-044 (#119) - Romain PHILIPPE - In silico detection of causal mutation in beef cattle
  • Post-045 (#133) - Guy-Ross ASSOUMOU-ELLA - Thaliadb: A database dedicated to association genetics in plants
  • Post-046 (#134) - Yannick DE OLIVIERA - SHiNeMaS: A database dedicated to seed lots history, phenotyping data and field practices
  • Post-047 (#141) - Lydia AIT BRAHAM - BioMercator: A complete framework to integrate QTL, meta-QTL, genome annotation and genome-wide association studies
  • Post-048 (#150) - Ankit DWIVENDI - Characterization of P.falciparum sub-populations associated to artemisinin drug resistance in Cambodia
  • Post-049 (#162) - Clément AGRET - Use of Illumina sequencing for accessing viral genomes Cocoa swollen shoot virus (CSSV)
  • Post-050 (#166) - Gilles CHARMET - Breeding value estimation for Yield and Quality traits using BWGS pipeline
  • Post-051 (#2) - Marie-Laure FRANCHINARD - View and synchronize several genotypes with IGV
  • Post-052 (#22) - Hugo VARET - SARTools: a DESeq2- and edgeR-based R pipeline for comprehensive differential analysis of RNA-seq data
  • Post-053 (#43) - Lise POMIES - Strategy for inferring gene regulatory network from kinetic expression with an unfavorable data-to-variables ratio
  • Post-054 (#49) - Arnaud MENG - De novo assembly pipeline for transcriptomic analysis
  • Post-055 (#56) - Xi LIU - Looking for SCPP transcripts in jaw transcriptomes
  • Post-056 (#60) - Aurélien QUILLET - miRabel: a web tool for an effective prediction of microRNA targets and their related biological pathways
  • Post-057 (#64) - Gaëlle VILCHEZ - NGS Goes Automatic: From library preparation to data quality control
  • Post-058 (#66) - Varun KHANNA - Analysis of diploid genomes with Next-Generation Sequencing (NGS)
  • Post-059 (#69) - Bastien JOB - ASSESS.LINE: How good are my cell lines?
  • Post-060 (#71) - Stevenn VOLANT - A novel statistical approach and R package to analyse HDX-MS of protein- protein interactions
  • Post-061 (#74) - Justine RUDEWICZ - Looking for mutations in PacBio cancer data: an alignment-free method
  • Post-062 (#75) - Patrice BAA-PUYOULET - From SymbAphidBase to SymbAphidCyc: two companion databases to study and compare aphid symbionts from genomes to metabolic pathways
  • Post-063 (#99) - Bernd JAGLA - Decoupling RNAseq data from genomic context to help understanding the data
  • Post-064 (#103) - François BARTOLO - Computational optimisation for mixOmics, the R package dedicated to ’omics’ data integration
  • Post-065 (#105) - Guillaume REBOUL - Approche intégrée pour la découverte de nouvelles activités enzymatiques
  • Post-066 (#108) - Nicolas PARISOT - MicroAnnot: a pipeline for high quality microsporidian genomes annotation
  • Post-067 (#110) - Pierre-Julien VIALLY- GenerateReports: an IonTorrent plugin summarizing a whole NGS experiment for clinical interpretation
  • Post-068 (#115) - Guillaume GAUTREAU - Genome assembly using Nanopore-guided Long and Error-free DNA Reads
  • Post-069 (#124) - Elise LARSONNEUR - Evaluation of de novo assemblies in view of creating automated pipelines dedicated to core-genome bacterial typing
  • Post-070 (#127) - Dhouha. GRISSA - Knowledge Discovery based on Formal Concept Analysis for biomarker identification from metabolomic data
  • Post-071 (#143) - Sacha BEAUMEUNIER - Rôle de l'apprentissage automatique dans le problème de détection d'ARN chimères
  • Post-072 (#145) - Imène CHENTLI - Semi-automatic biological data mining workflow
  • Post-073 (#148) - Amal Zine EL AABIDINE - Long reads based assembly and impact of error correction   
  • Post-074 (#151) - Magali BERLAND - Metagenomic data analysis: from reads to biomarkers with METEOR and MetaOMineR
  • Post-075 (#155) - Fabrice TOUZAIN - Bioinformatics reconstruction of the first complete genome sequence of European Turkey coronavirus by NGS sequencing, DB matching, tblastn gap filling, assemblies merging and realignment
  • Post-076 (#30) - Gisèle BRONNER - ePANAM and the phylogenetic diversity of microbial communities      
  • Post-077 (#40) - Yannick LAURENT - MetaBiote® Online: a user-friendly and dedicated tool for the taxonomic profiling of microbial communities      
  • Post-078 (#78) - Jimmy H.W. SAW - A novel phylum-level archaea characterized by combining single-cell and metagenomic approaches
  • Post-080 (#83) - Lucas AUER - How to design an efficient and robust pipeline for 16S rRNA-gene sequence analysis to improve our understanding on microbial communities?
  • Post-081 (#84) - Charlie PAUVERT - Accurate taxonomy assignments in cheeses ecosystems via a metagenomic approach
  • Post-082 (#93) - Nicolas PARISOT - Selection of oligonucleotide probes for high-throughput exploration of complex environments
  • Post-083 (#97) - Lucas AUER - FROGS: Find Rapidly OTU with Galaxy Solution
  • Post-084 (#100) - Cyrielle GASC - Gene capture by hybridization for accurate taxonomic affiliation
  • Post-85 (#104) - Pierre PERICARD - Sensitive recovery of wild-type markers from metatranscriptomic data
  • Post-086 (#121) - Anne OUDART - panam2Pprobe, a tool for designing primers from high-throughput sequencing
  • Post-087 (#131) - Corentin HOCHART - Virome data analysis by cross-assemblage
  • Post-088 (#149) - Catherine BRETON - Métabarcode et réseaux de co-occurence révèlent l’impact des perturbations sur les communautés associées aux herbiers de zostères
  • Post-089 (#81) - Stéphanie BORNES - Influence des procédés de fabrication industrielle sur l’expression génique du Lactobacillus rhamnosus Lcr35®
  • Post-090 (#126) - Jules CISSOKO - NutriQuantic : une Application Smartphone pour Déterminer l’Adéquation de la Prise Alimentaire vis-à-vis des Recommandations Nutritionnelles
  • Post-091 (#137) - Nadia BESSOLTANE-BENTAHAR - RNAseq analysis: Evaluation of response to anastrozole and fulvestrant in postmenopausal women with estrogen receptor (ER)-positive breast cancer
  • Post-092 (#7) - Imene BOUDELLIOUA - Association Rule Mining for Metabolic Pathway Prediction
  • Post-093 (#9) - Cécile MONAT - TOGGLE: TOolbox for Generic nGs analyses
  • Post-094 (#10) - Michael ALAUX - Wheat@URGI website for genomics, genetics and phenomics wheat data
  • Post-095 (#11) - Ndomassi TANDO - Framboisine: A mini-cluster solution for the Southern Countries
  • Post-096 (#21) - Luyen LE NGOC - Development of a generic indexing tool to optimize the use of biological data
  • Post-097 (#24) - Jocelyn BRAYET - Integration of RSAT tools in Galaxy with SOAP web services
  • Post-098 (#25) - Martial BRIAND - Orthomcl-Companion : un outil d'aide à l'interprétation d'analyses de familles protéiques
  • Post-099 (#27) - Aurélien BERNARD - TriAnnot: A workflow for plant genome automated structural and functional annotation – international distribution
  • Post-100 (#28) - Simon PENEL - Nouveaux développements dans la construction de HOGENOM une base de données de phylogénomique
  • Post-101 (#37) - Hiba ABI HUSSEIN - PockDrug-Server: a web server for predicting pocket druggability     
  • Post-102 (#41) - Arnaud KRESS - Workflows for comparative protein analysis using PipeAlign in Galaxy
  • Post-103 (#50) - Alexis ALLOT - MyGeneFriends: a social network linking genes, diseases and researchers
  • Post-104 (#52) - Mathilde LAINÉ - BreedWheat genotyping and phenotyping data in GnpIS information system
  • Post-105 (#59) - Florian PHILIPPE - Data integration in the agronomic domain: national and international data discovery system               
  • Post-106 (#65) - Guillaume MERCERON - GnpAsso: a generic workbench for managing and exploiting genetic association studies results using high throughput genotyping and phenotyping data
  • Post-107 (#76) - Vincent J. HENRY - OMIC-Onto: a resource for search and indexation of databases and analytical software for omic data
  • Post-108 (#80) - Emeric SEVIN - de novo Assembly of large and complex genomes: a cloud-oriented hybrid solution
  • Post-109 (#94) - Juraj MICHALIK - Mise à jour du site web spécialisé à l'analyse des CRISPRs
  • Post-110 (#107) - Thibault DAYRIS - The transcript isoform quantification conundrum: an overview
  • Post-111 (#113) - Benoit Bely - How UniProtKB/TrEMBL Tackles High Redundant Proteomes
  • Post-112 (#116) - Sandrine PERRIN - An automated and modular output quality control pipeline for Illumina sequencers
  • Post-113 (#118) - Sophie LEMOINE - Validate and keep up-to-date the annotations dedicated to RNA-Seq
  • Post-114 (#123) - Nicolas FRANCILLONNE - A computational architecture designed for genome annotation: oak genome sequencing project as a use case
  • Post-115 (#128) - Artem KOURLAIEV - TASKMANAGER: Massively parallelizable workflow management
  • Post-116 (#139) - Rachel TORCHET - HUB Bioinformatique et Biostatistique à l’Institut Pasteur
  • Post-117 (#156) - Christophe BLANCHET - Le Cloud Académique IFB pour les Sciences du Vivant
  • Post-118 (#159) - Marie GROSJEAN - A RAINBio over the Life Sciences Cloud